MJ

Marc-Antoine Jacques

Postdoc

Biography

I have a mixed background in biotechnology (Engineering degree, 2013-2016, ESBS, Strasbourg), biophysics (Msc, 2015-2016, University of Strasbourg), and bioinformatics (Msc, 2016-2018, University of Bern). For my PhD (2018–2022), I worked in the lab of Olivier Pertz at the University of Bern. There, I developed computational techniques to study signalling dynamics in individual cells using live microscopy. My work contributed to new insights into cancer, signalling networks, epithelium homeostasis, and the prediction of cellular perturbations. I then joined the lab of John Marioni at the University of Cambridge and EMBL-EBI (2022–2025) as an EMBO postdoctoral fellow, where I developed methods to compare and predict single-cell transcriptomics atlases across species, with a focus on early embryo development.

Research Interests

In October 2025, I joined the Saez lab for a second postdoc, in collaboration with GSK, to study fibrosis across multiple organs. I plan to leverage my background in dynamical biological systems and my expertise in single-cell analysis to build a multi-scale picture of how fibrosis develops. By integrating diverse data modalities, I aim to identify both organ-specific and common mechanisms underlying fibrosis, with the ultimate goal of translating these insights into new therapeutic strategies.

Professional Career

2025-present

Postdoc in the group Julio Saez at EMBL-EBI

2022-2025

Postdoc in the group John Marioni at University of Cambridge and EMBL-EBI

Education

2018-2022

PhD in Bioinformatics and Computational Biology - University of Bern - Switzerland

2016-2018

Msc in Bioinformatics - University of Bern - Switzerland - Summa cum laude

2015-2016

Msc in Cell Physics - UFR Physique, University of Strasbourg - France

2013-2016

Engineering degree in Biotechnology - École Supérieure de Biotechnologie Strasbourg (ESBS) - France

2011-2013

Classe préparatoire BCPST (biology, chemistry, physics, geology, mathematics) - Lycée Carnot, Dijon - France

Contact Information